Soren Germer

InstitutionNew York Genome Center
AddressNew York
United States
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    Publication Timeline
    COVID-19 publications
    Bar chart showing 2 Covid-19 publications, with a maximum of 1 publications in October 2020 and August 2021
    All Publications
    Bar chart showing 21 publications over 13 distinct years, with a maximum of 3 publications in 2010
    These graphs show COVID-19 publications by month since August 2019 and all publications written by authors of COVID-19 publications over the past 30 years.

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    Publication Field Summary
    This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.
    Publication List
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Chen L, Zody MC, Di Germanio C, Martinelli R, Mediavilla JR, Cunningham MH, Composto K, Chow KF, Kordalewska M, Corvelo A, Oschwald DM, Fennessey S, Zetkulic M, Dar S, Kramer Y, Mathema B, Germer S, Stone M, Simmons G, Busch MP, Maniatis T, Perlin DS, Kreiswirth BN. Emergence of Multiple SARS-CoV-2 Antibody Escape Variants in an Immunocompromised Host Undergoing Convalescent Plasma Treatment. mSphere. 2021 08 25; 6(4):e0048021. PMID: 34431691.
      Citations: 7   Article has an altmetric score of 18    Fields:    Translation:HumansCellsPHPublic Health
    2. Sajuthi SP, DeFord P, Li Y, Jackson ND, Montgomery MT, Everman JL, Rios CL, Pruesse E, Nolin JD, Plender EG, Wechsler ME, Mak ACY, Eng C, Salazar S, Medina V, Wohlford EM, Huntsman S, Nickerson DA, Germer S, Zody MC, Abecasis G, Kang HM, Rice KM, Kumar R, Oh S, Rodriguez-Santana J, Burchard EG, Seibold MA. Type 2 and interferon inflammation regulate SARS-CoV-2 entry factor expression in the airway epithelium. Nat Commun. 2020 10 12; 11(1):5139. PMID: 33046696.
      Citations: 42   Article has an altmetric score of 50    Fields:    Translation:HumansCellsPHPublic Health
    3. Suzuki M, Liao W, Wos F, Johnston AD, DeGrazia J, Ishii J, Bloom T, Zody MC, Germer S, Greally JM. Whole-genome bisulfite sequencing with improved accuracy and cost. Genome Res. 2018 09; 28(9):1364-1371. PMID: 30093547.
      Citations: 15   Article has an altmetric score of 26    Fields:    Translation:HumansCells
    4. Fan PD, Narzisi G, Jayaprakash AD, Venturini E, Robine N, Smibert P, Germer S, Yu HA, Jordan EJ, Paik PK, Janjigian YY, Chaft JE, Wang L, Jungbluth AA, Middha S, Spraggon L, Qiao H, Lovly CM, Kris MG, Riely GJ, Politi K, Varmus H, Ladanyi M. YES1 amplification is a mechanism of acquired resistance to EGFR inhibitors identified by transposon mutagenesis and clinical genomics. Proc Natl Acad Sci U S A. 2018 06 26; 115(26):E6030-E6038. PMID: 29875142.
      Citations: 17   Article has an altmetric score of 20    Fields:    Translation:HumansCells
    5. Freudenberg-Hua Y, Li W, Abhyankar A, Vacic V, Cortes V, Ben-Avraham D, Koppel J, Greenwald B, Germer S, Darnell RB, Barzilai N, Freudenberg J, Atzmon G, Davies P. Differential burden of rare protein truncating variants in Alzheimer's disease patients compared to centenarians. Hum Mol Genet. 2016 07 15; 25(14):3096-3105. PMID: 27260402.
      Citations: 5   Article has an altmetric score of 12    Fields:    Translation:Humans
    6. Freudenberg-Hua Y, Freudenberg J, Vacic V, Abhyankar A, Emde AK, Ben-Avraham D, Barzilai N, Oschwald D, Christen E, Koppel J, Greenwald B, Darnell RB, Germer S, Atzmon G, Davies P. Disease variants in genomes of 44 centenarians. Mol Genet Genomic Med. 2014 Sep; 2(5):438-50. PMID: 25333069.
      Citations: 32   Article has an altmetric score of 25    Fields:    
    7. Honeyman JN, Simon EP, Robine N, Chiaroni-Clarke R, Darcy DG, Lim II, Gleason CE, Murphy JM, Rosenberg BR, Teegan L, Takacs CN, Botero S, Belote R, Germer S, Emde AK, Vacic V, Bhanot U, LaQuaglia MP, Simon SM. Detection of a recurrent DNAJB1-PRKACA chimeric transcript in fibrolamellar hepatocellular carcinoma. Science. 2014 Feb 28; 343(6174):1010-4. PMID: 24578576.
      Citations: 141   Article has an altmetric score of 409    Fields:    Translation:HumansCells
    8. Ho JS, Germer S, Tam CH, So WY, Martin M, Ma RC, Chan JC, Ng MC. Association of the PPARG Pro12Ala polymorphism with type 2 diabetes and incident coronary heart disease in a Hong Kong Chinese population. Diabetes Res Clin Pract. 2012 Sep; 97(3):483-91. PMID: 22515931.
      Citations: 11   Fields:    Translation:Humans
    9. Chu TW, Kulkarni R, Gane EJ, Roberts SK, Stedman C, Angus PW, Ritchie B, Lu XY, Ipe D, Lopatin U, Germer S, Iglesias VA, Elston R, Smith PF, Shulman NS. Effect of IL28B genotype on early viral kinetics during interferon-free treatment of patients with chronic hepatitis C. Gastroenterology. 2012 Apr; 142(4):790-5. PMID: 22248659.
      Citations: 32   Article has an altmetric score of 12    Fields:    Translation:HumansCells
    10. Su F, Bradley WD, Wang Q, Yang H, Xu L, Higgins B, Kolinsky K, Packman K, Kim MJ, Trunzer K, Lee RJ, Schostack K, Carter J, Albert T, Germer S, Rosinski J, Martin M, Simcox ME, Lestini B, Heimbrook D, Bollag G. Resistance to selective BRAF inhibition can be mediated by modest upstream pathway activation. Cancer Res. 2012 Feb 15; 72(4):969-78. PMID: 22205714.
      Citations: 77   Article has an altmetric score of 22    Fields:    Translation:HumansAnimalsCells
    11. Lee JS, Wang J, Martin M, Germer S, Kenwright A, Benayed R, Spleiss O, Platt A, Pilson R, Hemmings A, Weinblatt ME, Kaplowitz N, Krasnow J. Genetic variation in UGT1A1 typical of Gilbert syndrome is associated with unconjugated hyperbilirubinemia in patients receiving tocilizumab. Pharmacogenet Genomics. 2011 Jul; 21(7):365-74. PMID: 21412181.
      Citations: 2   Fields:    Translation:Humans
    12. Romero JR, Castonguay AJ, Barton NS, Germer S, Martin M, Zee RY. Gene variation of the transient receptor potential cation channel, subfamily M, members 6 (TRPM6) and 7 (TRPM7), and type 2 diabetes mellitus: a case-control study. Transl Res. 2010 Oct; 156(4):235-41. PMID: 20875900.
      Citations: 9   Fields:    Translation:Humans
    13. Tam CH, Ho JS, Wang Y, Lee HM, Lam VK, Germer S, Martin M, So WY, Ma RC, Chan JC, Ng MC. Common polymorphisms in MTNR1B, G6PC2 and GCK are associated with increased fasting plasma glucose and impaired beta-cell function in Chinese subjects. PLoS One. 2010 Jul 08; 5(7):e11428. PMID: 20628598.
      Citations: 30   Fields:    Translation:HumansCells
    14. Romero JR, Germer S, Castonguay AJ, Barton NS, Martin M, Zee RY. Gene variation of the transient receptor potential cation channel, subfamily M, member 2 (TRPM2) and type 2 diabetes mellitus: A case-control study. Clin Chim Acta. 2010 Oct 09; 411(19-20):1437-40. PMID: 20515676.
      Citations: 2   Fields:    Translation:HumansCells
    15. Zee RY, Castonguay AJ, Barton NS, Germer S, Martin M. Mean leukocyte telomere length shortening and type 2 diabetes mellitus: a case-control study. Transl Res. 2010 Apr; 155(4):166-9. PMID: 20303464.
      Citations: 71   Fields:    Translation:HumansCells
    16. Zee RY, Michaud SE, Germer S, Ridker PM. Association of shorter mean telomere length with risk of incident myocardial infarction: a prospective, nested case-control approach. Clin Chim Acta. 2009 May; 403(1-2):139-41. PMID: 19217888.
      Citations: 36   Article has an altmetric score of 1    Fields:    Translation:HumansCells
    17. Tam CH, Ma RC, So WY, Wang Y, Lam VK, Germer S, Martin M, Chan JC, Ng MC. Interaction effect of genetic polymorphisms in glucokinase (GCK) and glucokinase regulatory protein (GCKR) on metabolic traits in healthy Chinese adults and adolescents. Diabetes. 2009 Mar; 58(3):765-9. PMID: 19073768.
      Citations: 30   Article has an altmetric score of 3    Fields:    Translation:Humans
    18. McHale CM, Lan Q, Corso C, Li G, Zhang L, Vermeulen R, Curry JD, Shen M, Turakulov R, Higuchi R, Germer S, Yin S, Rothman N, Smith MT. Chromosome translocations in workers exposed to benzene. J Natl Cancer Inst Monogr. 2008; (39):74-7. PMID: 18648008.
      Citations: 9   Article has an altmetric score of 6    Fields:    Translation:HumansCellsPHPublic Health
    19. Zee RY, Germer S, Thomas A, Raji A, Rhees B, Ridker PM, Lindpaintner K, Williams GH, Nathan DM, Martin M. C-reactive protein gene variation and type 2 diabetes mellitus: a case-control study. Atherosclerosis. 2008 Apr; 197(2):931-6. PMID: 17900590.
      Citations: 13   Fields:    Translation:Humans
    20. Wang J, Chuang K, Ahluwalia M, Patel S, Umblas N, Mirel D, Higuchi R, Germer S. High-throughput SNP genotyping by single-tube PCR with Tm-shift primers. Biotechniques. 2005 Dec; 39(6):885-93. PMID: 16382908.
      Citations: 49   Article has an altmetric score of 10    Fields:    Translation:Humans
    21. Rollinson S, Allan JM, Law GR, Roddam PL, Smith MT, Skibola C, Smith AG, Forrest MS, Sibley K, Higuchi R, Germer S, Morgan GJ. High-throughput association testing on DNA pools to identify genetic variants that confer susceptibility to acute myeloid leukemia. Cancer Epidemiol Biomarkers Prev. 2004 May; 13(5):795-800. PMID: 15159312.
      Citations: 4   Fields:    Translation:HumansCells