Gennady M Verkhivker

InstitutionChapman University School of Pharmacy
AddressIrvine
California
United States
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    Publication Timeline
    COVID-19 publications
    Bar chart showing 9 Covid-19 publications, with a maximum of 3 publications in June 2021
    All Publications
    Bar chart showing 70 publications over 20 distinct years, with a maximum of 6 publications in 2009 and 2018 and 2021
    These graphs show COVID-19 publications by month since August 2019 and all publications written by authors of COVID-19 publications over the past 30 years.

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    Publication Field Summary
    This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.
    Publication List
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Verkhivker G, Agajanian S, Oztas D, Gupta G. Dynamic Profiling of Binding and Allosteric Propensities of the SARS-CoV-2 Spike Protein with Different Classes of Antibodies: Mutational and Perturbation-Based Scanning Reveals the Allosteric Duality of Functionally Adaptable Hotspots. J Chem Theory Comput. 2021 Jul 13; 17(7):4578-4598. PMID: 34138559.
      Citations: 2     Fields:    Translation:HumansCells
    2. Verkhivker GM, Agajanian S, Oztas DY, Gupta G. Landscape-Based Mutational Sensitivity Cartography and Network Community Analysis of the SARS-CoV-2 Spike Protein Structures: Quantifying Functional Effects of the Circulating D614G Variant. ACS Omega. 2021 Jun 22; 6(24):16216-16233. PMID: 34179666.
      Citations: 1     
    3. Verkhivker GM, Agajanian S, Oztas D, Gupta G. Computational analysis of protein stability and allosteric interaction networks in distinct conformational forms of the SARS-CoV-2 spike D614G mutant: reconciling functional mechanisms through allosteric model of spike regulation. J Biomol Struct Dyn. 2021 Jun 01; 1-18. PMID: 34060425.
      Citations: 2     Fields:    
    4. Verkhivker GM, Di Paola L. Integrated Biophysical Modeling of the SARS-CoV-2 Spike Protein Binding and Allosteric Interactions with Antibodies. J Phys Chem B. 2021 05 13; 125(18):4596-4619. PMID: 33929853.
      Citations: 5     Fields:    Translation:HumansCells
    5. Verkhivker GM, Agajanian S, Oztas DY, Gupta G. Comparative Perturbation-Based Modeling of the SARS-CoV-2 Spike Protein Binding with Host Receptor and Neutralizing Antibodies: Structurally Adaptable Allosteric Communication Hotspots Define Spike Sites Targeted by Global Circulating Mutations. Biochemistry. 2021 05 18; 60(19):1459-1484. PMID: 33900725.
      Citations: 7     Fields:    Translation:HumansCells
    6. Verkhivker GM, Di Paola L. Dynamic Network Modeling of Allosteric Interactions and Communication Pathways in the SARS-CoV-2 Spike Trimer Mutants: Differential Modulation of Conformational Landscapes and Signal Transmission via Cascades of Regulatory Switches. J Phys Chem B. 2021 01 28; 125(3):850-873. PMID: 33448856.
      Citations: 6     Fields:    Translation:Cells
    7. Verkhivker G. Coevolution, Dynamics and Allostery Conspire in Shaping Cooperative Binding and Signal Transmission of the SARS-CoV-2 Spike Protein with Human Angiotensin-Converting Enzyme 2. Int J Mol Sci. 2020 Nov 04; 21(21). PMID: 33158276.
      Citations: 3     Fields:    Translation:HumansCellsPHPublic Health
    8. Verkhivker GM. Molecular Simulations and Network Modeling Reveal an Allosteric Signaling in the SARS-CoV-2 Spike Proteins. J Proteome Res. 2020 11 06; 19(11):4587-4608. PMID: 33006900.
      Citations: 14     Fields:    Translation:HumansCellsPHPublic Health
    9. Sheik Amamuddy O, Verkhivker GM, Tastan Bishop Ö. Impact of Early Pandemic Stage Mutations on Molecular Dynamics of SARS-CoV-2 Mpro. J Chem Inf Model. 2020 10 26; 60(10):5080-5102. PMID: 32853525.
      Citations: 17     Fields:    Translation:HumansCellsPHPublic Health