Matthew Cotten

InstitutionWellcome Trust Sanger Institute
AddressHinxton
United Kingdom
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    Publication Timeline
    COVID-19 publications
    Bar chart showing 4 Covid-19 publications, with a maximum of 1 publications in July 2020 and October 2020 and February 2021 and June 2021
    All Publications
    Bar chart showing 58 publications over 15 distinct years, with a maximum of 12 publications in 2016
    These graphs show COVID-19 publications by month since August 2019 and all publications written by authors of COVID-19 publications over the past 30 years.

    To see the data from both graphs as text, click here.
    Publication Field Summary
    This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.
    Publication List
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Bugembe DL, Phan MVT, Ssewanyana I, Semanda P, Nansumba H, Dhaala B, Nabadda S, O'Toole ÁN, Rambaut A, Kaleebu P, Cotten M. Emergence and spread of a SARS-CoV-2 lineage A variant (A.23.1) with altered spike protein in Uganda. Nat Microbiol. 2021 08; 6(8):1094-1101. PMID: 34163035.
      Citations: 20     Fields:    Translation:HumansCells
    2. Cotten M, Lule Bugembe D, Kaleebu P, V T Phan M. Alternate primers for whole-genome SARS-CoV-2 sequencing. Virus Evol. 2021 Jan; 7(1):veab006. PMID: 33841912.
      Citations: 1     
    3. Nalumansi A, Lutalo T, Kayiwa J, Watera C, Balinandi S, Kiconco J, Nakaseegu J, Olara D, Odwilo E, Serwanga J, Kikaire B, Ssemwanga D, Nabadda S, Ssewanyana I, Atwine D, Mwebesa H, Bosa HK, Nsereko C, Cotten M, Downing R, Lutwama J, Kaleebu P. Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples. Int J Infect Dis. 2021 Mar; 104:282-286. PMID: 33130198.
      Citations: 19     Fields:    Translation:Humans
    4. Bugembe DL, Kayiwa J, Phan MVT, Tushabe P, Balinandi S, Dhaala B, Lexow J, Mwebesa H, Aceng J, Kyobe H, Ssemwanga D, Lutwama J, Kaleebu P, Cotten M. Main Routes of Entry and Genomic Diversity of SARS-CoV-2, Uganda. Emerg Infect Dis. 2020 10; 26(10):2411-2415. PMID: 32614767.
      Citations: 5     Fields:    Translation:HumansCellsPHPublic Health
    5. Phan MVT, Ngo Tri T, Hong Anh P, Baker S, Kellam P, Cotten M. Identification and characterization of Coronaviridae genomes from Vietnamese bats and rats based on conserved protein domains. Virus Evol. 2018 Jul; 4(2):vey035. PMID: 30568804.
      Citations: 18     
    6. Kiyuka PK, Agoti CN, Munywoki PK, Njeru R, Bett A, Otieno JR, Otieno GP, Kamau E, Clark TG, van der Hoek L, Kellam P, Nokes DJ, Cotten M. Human Coronavirus NL63 Molecular Epidemiology and Evolutionary Patterns in Rural Coastal Kenya. J Infect Dis. 2018 05 05; 217(11):1728-1739. PMID: 29741740.
      Citations: 51     Fields:    Translation:HumansCells
    7. Zumla A, Alagaili AN, Cotten M, Azhar EI. Infectious diseases epidemic threats and mass gatherings: refocusing global attention on the continuing spread of the Middle East Respiratory syndrome coronavirus (MERS-CoV). BMC Med. 2016 09 07; 14(1):132. PMID: 27604081.
      Citations: 13     Fields:    Translation:HumansCellsPHPublic Health
    8. Zumla A, Dar O, Kock R, Muturi M, Ntoumi F, Kaleebu P, Eusebio M, Mfinanga S, Bates M, Mwaba P, Ansumana R, Khan M, Alagaili AN, Cotten M, Azhar EI, Maeurer M, Ippolito G, Petersen E. Taking forward a 'One Health' approach for turning the tide against the Middle East respiratory syndrome coronavirus and other zoonotic pathogens with epidemic potential. Int J Infect Dis. 2016 Jun; 47:5-9. PMID: 27321961.
      Citations: 33     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    9. Memish ZA, Cotten M, Meyer B, Watson SJ, Alsahafi AJ, Al Rabeeah AA, Corman VM, Sieberg A, Makhdoom HQ, Assiri A, Al Masri M, Aldabbagh S, Bosch BJ, Beer M, Müller MA, Kellam P, Drosten C. Human infection with MERS coronavirus after exposure to infected camels, Saudi Arabia, 2013. Emerg Infect Dis. 2014 Jun; 20(6):1012-5. PMID: 24857749.
      Citations: 164     Fields:    Translation:HumansAnimalsCells
    10. Memish ZA, Al-Tawfiq JA, Makhdoom HQ, Assiri A, Alhakeem RF, Albarrak A, Alsubaie S, Al-Rabeeah AA, Hajomar WH, Hussain R, Kheyami AM, Almutairi A, Azhar EI, Drosten C, Watson SJ, Kellam P, Cotten M, Zumla A. Respiratory tract samples, viral load, and genome fraction yield in patients with Middle East respiratory syndrome. J Infect Dis. 2014 Nov 15; 210(10):1590-4. PMID: 24837403.
      Citations: 76     Fields:    Translation:HumansCells
    11. Memish ZA, Cotten M, Watson SJ, Kellam P, Zumla A, Alhakeem RF, Assiri A, Rabeeah AA, Al-Tawfiq JA. Community case clusters of Middle East respiratory syndrome coronavirus in Hafr Al-Batin, Kingdom of Saudi Arabia: a descriptive genomic study. Int J Infect Dis. 2014 Jun; 23:63-8. PMID: 24699184.
      Citations: 43     Fields:    Translation:HumansAnimalsCellsPHPublic Health
    12. Cotten M, Watson SJ, Zumla AI, Makhdoom HQ, Palser AL, Ong SH, Al Rabeeah AA, Alhakeem RF, Assiri A, Al-Tawfiq JA, Albarrak A, Barry M, Shibl A, Alrabiah FA, Hajjar S, Balkhy HH, Flemban H, Rambaut A, Kellam P, Memish ZA. Spread, circulation, and evolution of the Middle East respiratory syndrome coronavirus. mBio. 2014 Feb 18; 5(1). PMID: 24549846.
      Citations: 137     Fields:    Translation:HumansCells
    13. Cotten M, Watson SJ, Kellam P, Al-Rabeeah AA, Makhdoom HQ, Assiri A, Al-Tawfiq JA, Alhakeem RF, Madani H, AlRabiah FA, Al Hajjar S, Al-nassir WN, Albarrak A, Flemban H, Balkhy HH, Alsubaie S, Palser AL, Gall A, Bashford-Rogers R, Rambaut A, Zumla AI, Memish ZA. Transmission and evolution of the Middle East respiratory syndrome coronavirus in Saudi Arabia: a descriptive genomic study. Lancet. 2013 Dec 14; 382(9909):1993-2002. PMID: 24055451.
      Citations: 151     Fields:    Translation:HumansCellsPHPublic Health
    14. Assiri A, McGeer A, Perl TM, Price CS, Al Rabeeah AA, Cummings DA, Alabdullatif ZN, Assad M, Almulhim A, Makhdoom H, Madani H, Alhakeem R, Al-Tawfiq JA, Cotten M, Watson SJ, Kellam P, Zumla AI, Memish ZA. Hospital outbreak of Middle East respiratory syndrome coronavirus. N Engl J Med. 2013 Aug 01; 369(5):407-16. PMID: 23782161.
      Citations: 547     Fields:    Translation:HumansCellsPHPublic Health
    15. Cotten M, Lam TT, Watson SJ, Palser AL, Petrova V, Grant P, Pybus OG, Rambaut A, Guan Y, Pillay D, Kellam P, Nastouli E. Full-genome deep sequencing and phylogenetic analysis of novel human betacoronavirus. Emerg Infect Dis. 2013 May; 19(5):736-42B. PMID: 23693015.
      Citations: 85     Fields:    Translation:HumansAnimalsCells