Rommie E Amaro

InstitutionUniversity of California, San Diego
AddressCalifornia
United States
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    Publication Timeline
    COVID-19 publications
    Bar chart showing 11 Covid-19 publications, with a maximum of 2 publications in Spetember 2020 and November 2020
    All Publications
    Bar chart showing 121 publications over 17 distinct years, with a maximum of 19 publications in 2016
    These graphs show COVID-19 publications by month since August 2019 and all publications written by authors of COVID-19 publications over the past 30 years.

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    Publication Field Summary
    This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.
    Publication List
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Andreano E, Piccini G, Licastro D, Casalino L, Johnson NV, Paciello I, Dal Monego S, Pantano E, Manganaro N, Manenti A, Manna R, Casa E, Hyseni I, Benincasa L, Montomoli E, Amaro RE, McLellan JS, Rappuoli R. SARS-CoV-2 escape from a highly neutralizing COVID-19 convalescent plasma. Proc Natl Acad Sci U S A. 2021 09 07; 118(36). PMID: 34417349.
      Citations: 48     Fields:    Translation:HumansAnimalsCells
    2. Sztain T, Ahn SH, Bogetti AT, Casalino L, Goldsmith JA, Seitz E, McCool RS, Kearns FL, Acosta-Reyes F, Maji S, Mashayekhi G, McCammon JA, Ourmazd A, Frank J, McLellan JS, Chong LT, Amaro RE. A glycan gate controls opening of the SARS-CoV-2 spike protein. Nat Chem. 2021 10; 13(10):963-968. PMID: 34413500.
      Citations: 16     Fields:    Translation:HumansCells
    3. Muratov EN, Amaro R, Andrade CH, Brown N, Ekins S, Fourches D, Isayev O, Kozakov D, Medina-Franco JL, Merz KM, Oprea TI, Poroikov V, Schneider G, Todd MH, Varnek A, Winkler DA, Zakharov AV, Cherkasov A, Tropsha A. A critical overview of computational approaches employed for COVID-19 drug discovery. Chem Soc Rev. 2021 Aug 21; 50(16):9121-9151. PMID: 34212944.
      Citations: 10     Fields:    Translation:HumansPHPublic Health
    4. Sztain T, Amaro R, McCammon JA. Elucidation of Cryptic and Allosteric Pockets within the SARS-CoV-2 Main Protease. J Chem Inf Model. 2021 07 26; 61(7):3495-3501. PMID: 33939913.
      Citations: 7     Fields:    Translation:HumansCells
    5. Oliveira ASF, Ibarra AA, Bermudez I, Casalino L, Gaieb Z, Shoemark DK, Gallagher T, Sessions RB, Amaro RE, Mulholland AJ. A potential interaction between the SARS-CoV-2 spike protein and nicotinic acetylcholine receptors. Biophys J. 2021 03 16; 120(6):983-993. PMID: 33609494.
      Citations: 7     Fields:    Translation:HumansCells
    6. Mulholland AJ, Amaro RE. COVID19 - Computational Chemists Meet the Moment. J Chem Inf Model. 2020 12 28; 60(12):5724-5726. PMID: 33378852.
      Citations: 4     Fields:    Translation:Humans
    7. Yu A, Pak AJ, He P, Monje-Galvan V, Casalino L, Gaieb Z, Dommer AC, Amaro RE, Voth GA. A multiscale coarse-grained model of the SARS-CoV-2 virion. Biophys J. 2021 03 16; 120(6):1097-1104. PMID: 33253634.
      Citations: 17     Fields:    Translation:Cells
    8. Barros EP, Casalino L, Gaieb Z, Dommer AC, Wang Y, Fallon L, Raguette L, Belfon K, Simmerling C, Amaro RE. The flexibility of ACE2 in the context of SARS-CoV-2 infection. Biophys J. 2021 03 16; 120(6):1072-1084. PMID: 33189680.
      Citations: 26     Fields:    Translation:HumansCells
    9. Casalino L, Gaieb Z, Goldsmith JA, Hjorth CK, Dommer AC, Harbison AM, Fogarty CA, Barros EP, Taylor BC, McLellan JS, Fadda E, Amaro RE. Beyond Shielding: The Roles of Glycans in the SARS-CoV-2 Spike Protein. ACS Cent Sci. 2020 Oct 28; 6(10):1722-1734. PMID: 33140034.
      Citations: 142     
    10. Amaro RE, Mulholland AJ. Biomolecular Simulations in the Time of COVID19, and After. Comput Sci Eng. 2020 Nov-Dec; 22(6):30-36. PMID: 33100917.
      Citations: 9     
    11. Amaro RE, Mulholland AJ. A Community Letter Regarding Sharing Biomolecular Simulation Data for COVID-19. J Chem Inf Model. 2020 06 22; 60(6):2653-2656. PMID: 32255648.
      Citations: 21     Fields:    Translation:HumansCellsPHPublic Health
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