Sam Abbott

InstitutionCentre for Mathematical Modelling of Infectious Diseases
AddressLondon
United Kingdom
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    Publication Timeline
    COVID-19 publications
    Bar chart showing 16 Covid-19 publications, with a maximum of 4 publications in March 2021
    All Publications
    Bar chart showing 16 publications over 3 distinct years, with a maximum of 10 publications in 2020
    These graphs show COVID-19 publications by month since August 2019 and all publications written by authors of COVID-19 publications over the past 30 years.

    To see the data from both graphs as text, click here.
    Publication Field Summary
    This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.
    Publication List
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications.
    Sort By:     Newest   |   Oldest   |   Most Cited   |   Most Discussed
    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Sherratt K, Abbott S, Meakin SR, Hellewell J, Munday JD, Bosse N, Jit M, Funk S. Exploring surveillance data biases when estimating the reproduction number: with insights into subpopulation transmission of COVID-19 in England. Philos Trans R Soc Lond B Biol Sci. 2021 07 19; 376(1829):20200283. PMID: 34053260.
      Citations: 2     Fields:    Translation:HumansPHPublic Health
    2. Munday JD, Sherratt K, Meakin S, Endo A, Pearson CAB, Hellewell J, Abbott S, Bosse NI, Atkins KE, Wallinga J, Edmunds WJ, van Hoek AJ, Funk S. Implications of the school-household network structure on SARS-CoV-2 transmission under school reopening strategies in England. Nat Commun. 2021 03 29; 12(1):1942. PMID: 33782396.
      Citations: 5     Fields:    Translation:HumansPHPublic Health
    3. Leclerc QJ, Nightingale ES, Abbott S, Jombart T. Analysis of temporal trends in potential COVID-19 cases reported through NHS Pathways England. Sci Rep. 2021 03 29; 11(1):7106. PMID: 33782427.
      Citations: 2     Fields:    Translation:Humans
    4. Pavelka M, Van-Zandvoort K, Abbott S, Sherratt K, Majdan M, Jarcuška P, Krajcí M, Flasche S, Funk S. The impact of population-wide rapid antigen testing on SARS-CoV-2 prevalence in Slovakia. Science. 2021 05 07; 372(6542):635-641. PMID: 33758017.
      Citations: 27     Fields:    Translation:HumansPHPublic Health
    5. Davies NG, Abbott S, Barnard RC, Jarvis CI, Kucharski AJ, Munday JD, Pearson CAB, Russell TW, Tully DC, Washburne AD, Wenseleers T, Gimma A, Waites W, Wong KLM, van Zandvoort K, Silverman JD, Diaz-Ordaz K, Keogh R, Eggo RM, Funk S, Jit M, Atkins KE, Edmunds WJ. Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England. Science. 2021 04 09; 372(6538). PMID: 33658326.
      Citations: 454     Fields:    Translation:HumansPHPublic Health
    6. Gostic KM, McGough L, Baskerville EB, Abbott S, Joshi K, Tedijanto C, Kahn R, Niehus R, Hay JA, De Salazar PM, Hellewell J, Meakin S, Munday JD, Bosse NI, Sherrat K, Thompson RN, White LF, Huisman JS, Scire J, Bonhoeffer S, Stadler T, Wallinga J, Funk S, Lipsitch M, Cobey S. Practical considerations for measuring the effective reproductive number, Rt. PLoS Comput Biol. 2020 12; 16(12):e1008409. PMID: 33301457.
      Citations: 53     Fields:    Translation:Humans
    7. Russell TW, Golding N, Hellewell J, Abbott S, Wright L, Pearson CAB, van Zandvoort K, Jarvis CI, Gibbs H, Liu Y, Eggo RM, Edmunds WJ, Kucharski AJ. Reconstructing the early global dynamics of under-ascertained COVID-19 cases and infections. BMC Med. 2020 10 22; 18(1):332. PMID: 33087179.
      Citations: 44     Fields:    Translation:HumansCellsPHPublic Health
    8. Emery JC, Russell TW, Liu Y, Hellewell J, Pearson CA, Knight GM, Eggo RM, Kucharski AJ, Funk S, Flasche S, Houben RM. The contribution of asymptomatic SARS-CoV-2 infections to transmission on the Diamond Princess cruise ship. Elife. 2020 08 24; 9. PMID: 32831176.
      Citations: 25     Fields:    Translation:HumansCellsPHPublic Health
    9. Price DJ, Shearer FM, Meehan MT, McBryde E, Moss R, Golding N, Conway EJ, Dawson P, Cromer D, Wood J, Abbott S, McVernon J, McCaw JM. Early analysis of the Australian COVID-19 epidemic. Elife. 2020 08 13; 9. PMID: 32788039.
      Citations: 13     Fields:    Translation:HumansCellsPHPublic Health
    10. Jit M, Jombart T, Nightingale ES, Endo A, Abbott S, Edmunds WJ. Estimating number of cases and spread of coronavirus disease (COVID-19) using critical care admissions, United Kingdom, February to March 2020. Euro Surveill. 2020 05; 25(18). PMID: 32400358.
      Citations: 9     Fields:    Translation:HumansCellsPHPublic Health
    11. Jombart T, van Zandvoort K, Russell TW, Jarvis CI, Gimma A, Abbott S, Clifford S, Funk S, Gibbs H, Liu Y, Pearson CAB, Bosse NI, Eggo RM, Kucharski AJ, Edmunds WJ. Inferring the number of COVID-19 cases from recently reported deaths. Wellcome Open Res. 2020; 5:78. PMID: 32518842.
      Citations: 17     
    12. Endo A, Abbott S, Kucharski AJ, Funk S. Estimating the overdispersion in COVID-19 transmission using outbreak sizes outside China. Wellcome Open Res. 2020; 5:67. PMID: 32685698.
      Citations: 164     
    13. Imai N, Gaythorpe KAM, Abbott S, Bhatia S, van Elsland S, Prem K, Liu Y, Ferguson NM. Adoption and impact of non-pharmaceutical interventions for COVID-19. Wellcome Open Res. 2020; 5:59. PMID: 32529040.
      Citations: 29     
    14. Russell TW, Hellewell J, Jarvis CI, van Zandvoort K, Abbott S, Ratnayake R, Flasche S, Eggo RM, Edmunds WJ, Kucharski AJ. Estimating the infection and case fatality ratio for coronavirus disease (COVID-19) using age-adjusted data from the outbreak on the Diamond Princess cruise ship, February 2020. Euro Surveill. 2020 03; 25(12). PMID: 32234121.
      Citations: 167     Fields:    Translation:HumansCellsPHPublic Health
    15. Hellewell J, Abbott S, Gimma A, Bosse NI, Jarvis CI, Russell TW, Munday JD, Kucharski AJ, Edmunds WJ, Funk S, Eggo RM. Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts. Lancet Glob Health. 2020 04; 8(4):e488-e496. PMID: 32119825.
      Citations: 754     Fields:    Translation:HumansCellsPHPublic Health
    16. Abbott S, Hellewell J, Munday J, Funk S. The transmissibility of novel Coronavirus in the early stages of the 2019-20 outbreak in Wuhan: Exploring initial point-source exposure sizes and durations using scenario analysis. Wellcome Open Res. 2020; 5:17. PMID: 32322691.
      Citations: 25     
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