Connection

Co-Authors

This is a "connection" page, showing publications co-authored by Alexander Greninger and Keith Jerome.
Connection Strength

12.061
  1. The First Quarter of SARS-CoV-2 Testing: the University of Washington Medicine Experience. J Clin Microbiol. 2020 Jul 23; 58(8).
    View in: PubMed
    Score: 0.894
  2. Ultrasensitive Capture of Human Herpes Simplex Virus Genomes Directly from Clinical Samples Reveals Extraordinarily Limited Evolution in Cell Culture. mSphere. 2018 06 27; 3(3).
    View in: PubMed
    Score: 0.772
  3. Copy Number Heterogeneity, Large Origin Tandem Repeats, and Interspecies Recombination in Human Herpesvirus 6A (HHV-6A) and HHV-6B Reference Strains. J Virol. 2018 05 15; 92(10).
    View in: PubMed
    Score: 0.765
  4. Comparative genomic, transcriptomic, and proteomic reannotation of human herpesvirus 6. BMC Genomics. 2018 03 20; 19(1):204.
    View in: PubMed
    Score: 0.760
  5. Myeloablation-associated deletion of ORF4 in a human coronavirus 229E infection. NPJ Genom Med. 2017; 2:30.
    View in: PubMed
    Score: 0.737
  6. Rapid Metagenomic Next-Generation Sequencing during an Investigation of Hospital-Acquired Human Parainfluenza Virus 3 Infections. J Clin Microbiol. 2017 01; 55(1):177-182.
    View in: PubMed
    Score: 0.698
  7. Anti-SARS-CoV-2 Antibody Levels Measured by the AdviseDx SARS-CoV-2 Assay Are Concordant with Previously Available Serologic Assays but Are Not Fully Predictive of Sterilizing Immunity. J Clin Microbiol. 2021 08 18; 59(9):e0098921.
    View in: PubMed
    Score: 0.241
  8. Performance characteristics of the Abbott Alinity m SARS-CoV-2 assay. J Clin Virol. 2021 07; 140:104869.
    View in: PubMed
    Score: 0.236
  9. SARS-CoV-2 ORF6 Disrupts Bidirectional Nucleocytoplasmic Transport through Interactions with Rae1 and Nup98. mBio. 2021 04 13; 12(2).
    View in: PubMed
    Score: 0.235
  10. Analytical Sensitivity of the Abbott BinaxNOW COVID-19 Ag Card. J Clin Microbiol. 2021 02 18; 59(3).
    View in: PubMed
    Score: 0.233
  11. Sensitive Recovery of Complete SARS-CoV-2 Genomes from Clinical Samples by Use of Swift Biosciences' SARS-CoV-2 Multiplex Amplicon Sequencing Panel. J Clin Microbiol. 2020 12 17; 59(1).
    View in: PubMed
    Score: 0.230
  12. SARS-CoV-2 Viral Load on Admission Is Associated With 30-Day Mortality. Open Forum Infect Dis. 2020 Dec; 7(12):ofaa535.
    View in: PubMed
    Score: 0.228
  13. Neutralizing Antibodies Correlate with Protection from SARS-CoV-2 in Humans during a Fishery Vessel Outbreak with a High Attack Rate. J Clin Microbiol. 2020 10 21; 58(11).
    View in: PubMed
    Score: 0.227
  14. Cryptic transmission of SARS-CoV-2 in Washington state. Science. 2020 10 30; 370(6516):571-575.
    View in: PubMed
    Score: 0.226
  15. In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age. PLoS Biol. 2020 09; 18(9):e3000849.
    View in: PubMed
    Score: 0.225
  16. Pooling of SARS-CoV-2 samples to increase molecular testing throughput. J Clin Virol. 2020 10; 131:104570.
    View in: PubMed
    Score: 0.224
  17. Comparison of Commercially Available and Laboratory-Developed Assays for In Vitro Detection of SARS-CoV-2 in Clinical Laboratories. J Clin Microbiol. 2020 Jul 23; 58(8).
    View in: PubMed
    Score: 0.223
  18. Performance Characteristics of the Abbott Architect SARS-CoV-2 IgG Assay and Seroprevalence in Boise, Idaho. J Clin Microbiol. 2020 07 23; 58(8).
    View in: PubMed
    Score: 0.223
  19. Stability of SARS-CoV-2 in Phosphate-Buffered Saline for Molecular Detection. J Clin Microbiol. 2020 Jul 23; 58(8).
    View in: PubMed
    Score: 0.223
  20. Metagenomic Analysis Reveals Clinical SARS-CoV-2 Infection and Bacterial or Viral Superinfection and Colonization. Clin Chem. 2020 07 01; 66(7):966-972.
    View in: PubMed
    Score: 0.223
  21. Identification of multiple large deletions in ORF7a resulting in in-frame gene fusions in clinical SARS-CoV-2 isolates. J Clin Virol. 2020 08; 129:104523.
    View in: PubMed
    Score: 0.222
  22. Changes in SARS-CoV-2 Positivity Rate in Outpatients in Seattle and Washington State, March 1-April 16, 2020. JAMA. 2020 06 09; 323(22):2334-2336.
    View in: PubMed
    Score: 0.222
  23. Multiplexing primer/probe sets for detection of SARS-CoV-2 by qRT-PCR. J Clin Virol. 2020 08; 129:104499.
    View in: PubMed
    Score: 0.222
  24. Detection of SARS-CoV-2 by bronchoscopy after negative nasopharyngeal testing: Stay vigilant for COVID-19. Respir Med Case Rep. 2020; 30:101120.
    View in: PubMed
    Score: 0.222
  25. Comparative Performance of SARS-CoV-2 Detection Assays Using Seven Different Primer-Probe Sets and One Assay Kit. J Clin Microbiol. 2020 05 26; 58(6).
    View in: PubMed
    Score: 0.221
  26. Validation of SARS-CoV-2 detection across multiple specimen types. J Clin Virol. 2020 07; 128:104438.
    View in: PubMed
    Score: 0.220
  27. Limited Marginal Utility of Deep Sequencing for HIV Drug Resistance Testing in the Age of Integrase Inhibitors. J Clin Microbiol. 2018 12; 56(12).
    View in: PubMed
    Score: 0.199
  28. Isolation and characterization of the fall Chinook aquareovirus. Virol J. 2017 09 05; 14(1):170.
    View in: PubMed
    Score: 0.183
  29. Tuning DNA binding affinity and cleavage specificity of an engineered gene-targeting nuclease via surface display, flow cytometry and cellular analyses. Protein Eng Des Sel. 2017 07 01; 30(7):503-522.
    View in: PubMed
    Score: 0.181
  30. Rule-Out Outbreak: 24-Hour Metagenomic Next-Generation Sequencing for Characterizing Respiratory Virus Source for Infection Prevention. J Pediatric Infect Dis Soc. 2017 Jun 01; 6(2):168-172.
    View in: PubMed
    Score: 0.180
  31. Draft Genome Sequences of Six Novel Picorna-Like Viruses from Washington State Spiders. Genome Announc. 2017 Mar 02; 5(9).
    View in: PubMed
    Score: 0.177
  32. Genome Sequences of Three Novel Bunyaviruses, Two Novel Rhabdoviruses, and One Novel Nyamivirus from Washington State Moths. Genome Announc. 2017 Feb 16; 5(7).
    View in: PubMed
    Score: 0.176
  33. Specific allelic discrimination of N501Y and other SARS-CoV-2 mutations by ddPCR detects B.1.1.7 lineage in Washington State. J Med Virol. 2021 10; 93(10):5931-5941.
    View in: PubMed
    Score: 0.060
  34. Variants of concern are overrepresented among post-vaccination breakthrough infections of SARS-CoV-2 in Washington State. Clin Infect Dis. 2021 Jun 24.
    View in: PubMed
    Score: 0.060
  35. Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State. Sci Transl Med. 2021 05 26; 13(595).
    View in: PubMed
    Score: 0.059
  36. Endogenously Produced SARS-CoV-2 Specific IgG Antibodies May Have a Limited Impact on Clearing Nasal Shedding of Virus during Primary Infection in Humans. Viruses. 2021 03 20; 13(3).
    View in: PubMed
    Score: 0.058
  37. Low Prevalence of Severe Acute Respiratory Syndrome Coronavirus 2 Among Pregnant and Postpartum Patients With Universal Screening in Seattle, Washington. Clin Infect Dis. 2021 03 01; 72(5):869-872.
    View in: PubMed
    Score: 0.058
  38. Hydroxychloroquine with or without azithromycin for treatment of early SARS-CoV-2 infection among high-risk outpatient adults: A randomized clinical trial. EClinicalMedicine. 2021 Mar; 33:100773.
    View in: PubMed
    Score: 0.058
  39. Hospitalization and mortality associated with SARS-CoV-2 viral clades in COVID-19. Sci Rep. 2021 02 26; 11(1):4802.
    View in: PubMed
    Score: 0.058
  40. In silico detection of SARS-CoV-2 specific B-cell epitopes and validation in ELISA for serological diagnosis of COVID-19. Sci Rep. 2021 02 22; 11(1):4290.
    View in: PubMed
    Score: 0.058
  41. Clinical, laboratory, and temporal predictors of neutralizing antibodies against SARS-CoV-2 among COVID-19 convalescent plasma donor candidates. J Clin Invest. 2021 02 01; 131(3).
    View in: PubMed
    Score: 0.058
  42. Occurrence and Timing of Subsequent Severe Acute Respiratory Syndrome Coronavirus 2 Reverse-transcription Polymerase Chain Reaction Positivity Among Initially Negative Patients. Clin Infect Dis. 2021 01 27; 72(2):323-326.
    View in: PubMed
    Score: 0.058
  43. Prevalence of Coronavirus Disease 2019 Infection and Outcomes Among Symptomatic Healthcare Workers in Seattle, Washington. Clin Infect Dis. 2020 12 17; 71(10):2702-2707.
    View in: PubMed
    Score: 0.057
  44. Hydroxychloroquine as Postexposure Prophylaxis to Prevent Severe Acute Respiratory Syndrome Coronavirus 2 Infection : A Randomized Trial. Ann Intern Med. 2021 03; 174(3):344-352.
    View in: PubMed
    Score: 0.057
  45. Clinical Features and Outcomes of 105 Hospitalized Patients With COVID-19 in Seattle, Washington. Clin Infect Dis. 2020 11 19; 71(16):2167-2173.
    View in: PubMed
    Score: 0.057
  46. Direct RT-qPCR detection of SARS-CoV-2 RNA from patient nasopharyngeal swabs without an RNA extraction step. PLoS Biol. 2020 10; 18(10):e3000896.
    View in: PubMed
    Score: 0.057
  47. Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing. N Engl J Med. 2020 10 08; 383(15):1492-1494.
    View in: PubMed
    Score: 0.056
  48. Optimization and clinical validation of dual-target RT-LAMP for SARS-CoV-2. J Virol Methods. 2020 12; 286:113972.
    View in: PubMed
    Score: 0.056
  49. Prolonged persistence of PCR-detectable virus during an outbreak of SARS-CoV-2 in an inpatient geriatric psychiatry unit in King County, Washington. Am J Infect Control. 2021 03; 49(3):293-298.
    View in: PubMed
    Score: 0.056
  50. Outbreak Investigation of COVID-19 Among Residents and Staff of an Independent and Assisted Living Community for Older Adults in Seattle, Washington. JAMA Intern Med. 2020 Aug 01; 180(8):1101-1105.
    View in: PubMed
    Score: 0.056
  51. Reliability of self-sampling for accurate assessment of respiratory virus viral and immunologic kinetics. J Infect Dis. 2020 Jul 25.
    View in: PubMed
    Score: 0.056
  52. Preprocedural Surveillance Testing for SARS-CoV-2 in an Asymptomatic Population in the Seattle Region Shows Low Rates of Positivity. J Clin Microbiol. 2020 Jul 23; 58(8).
    View in: PubMed
    Score: 0.056
  53. Clinical evaluation of the BioFire® Respiratory Panel 2.1 and detection of SARS-CoV-2. J Clin Virol. 2020 08; 129:104538.
    View in: PubMed
    Score: 0.056
  54. Expedited SARS-CoV-2 screening of donors and recipients supports continued solid organ transplantation. Am J Transplant. 2020 11; 20(11):3106-3112.
    View in: PubMed
    Score: 0.056
  55. Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California. Science. 2020 07 31; 369(6503):582-587.
    View in: PubMed
    Score: 0.055
  56. Validation and verification of the Abbott RealTime SARS-CoV-2 assay analytical and clinical performance. J Clin Virol. 2020 08; 129:104474.
    View in: PubMed
    Score: 0.055
  57. Coast-to-Coast Spread of SARS-CoV-2 during the Early Epidemic in the United States. Cell. 2020 05 28; 181(5):990-996.e5.
    View in: PubMed
    Score: 0.055
  58. Detection of SARS-CoV-2 Among Residents and Staff Members of an Independent and Assisted Living Community for Older Adults - Seattle, Washington, 2020. MMWR Morb Mortal Wkly Rep. 2020 Apr 10; 69(14):416-418.
    View in: PubMed
    Score: 0.055
  59. Covid-19 in Critically Ill Patients in the Seattle Region - Case Series. N Engl J Med. 2020 05 21; 382(21):2012-2022.
    View in: PubMed
    Score: 0.055
  60. Comparison of Three Adenovirus Quantitative PCR Assays with ATCC Reference Strains and Clinical Samples. J Clin Microbiol. 2019 11; 57(11).
    View in: PubMed
    Score: 0.053
  61. Dual-strain genital herpes simplex virus type 2 (HSV-2) infection in the US, Peru, and 8 countries in sub-Saharan Africa: A nested cross-sectional viral genotyping study. PLoS Med. 2017 12; 14(12):e1002475.
    View in: PubMed
    Score: 0.047
  62. Prolonged Shedding of Human Coronavirus in Hematopoietic Cell Transplant Recipients: Risk Factors and Viral Genome Evolution. J Infect Dis. 2017 07 15; 216(2):203-209.
    View in: PubMed
    Score: 0.045
  63. Highly conserved intragenic HSV-2 sequences: Results from next-generation sequencing of HSV-2 UL and US regions from genital swabs collected from 3 continents. Virology. 2017 10; 510:90-98.
    View in: PubMed
    Score: 0.045
  64. Worldwide circulation of HSV-2 × HSV-1 recombinant strains. Sci Rep. 2017 03 13; 7:44084.
    View in: PubMed
    Score: 0.044
  65. Quantification of BK Virus Standards by Quantitative Real-Time PCR and Droplet Digital PCR Is Confounded by Multiple Virus Populations in the WHO BKV International Standard. Clin Chem. 2017 03; 63(3):761-769.
    View in: PubMed
    Score: 0.044
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.