COVID A
UTHORS
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Shelli F Farhadian
Institution
Yale University School of Medicine
Address
New Haven
Connecticut
United States
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Publication Timeline
COVID-19 publications
All Publications
These graphs show COVID-19 publications by month since August 2019 and all publications written by authors of COVID-19 publications over the past 30 years.
To see the data from both graphs as text,
click here
.
Year
Publications
2003
1
2011
1
2014
1
2017
1
2018
2
2020
12
2021
14
These graphs show COVID-19 publications by month since August 2019 and all publications written by authors of COVID-19 publications over the past 30 years.
To return to the graphs,
click here
.
Publication Field Summary
This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text,
click here
.
This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text,
click here
.
Publication List
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications.
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Covid-19 specific publications
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Most Discussed
PMC Citations
indicate the number of times the publication was cited by articles in PubMed Central, and the
Altmetric
score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.)
Fields
are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication.
Translation
tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
Lucas C
,
Klein J
,
Sundaram ME
,
Liu F
,
Wong P
,
Silva J
,
Mao T
,
Oh JE
,
Mohanty S
,
Huang J
,
Tokuyama M
,
Lu P
,
Venkataraman A
,
Park A
,
Israelow B
,
Vogels CBF
,
Muenker MC
,
Chang CH
,
Casanovas-Massana A
,
Moore AJ
,
Zell J
,
Fournier JB
,
Wyllie AL
,
Campbell M
,
Lee AI
,
Chun HJ
,
Grubaugh ND
,
Schulz WL
,
Farhadian S
,
Dela Cruz C
,
Ring AM
,
Shaw AC
,
Wisnewski AV
,
Yildirim I
,
Ko AI
,
Omer SB
,
Iwasaki A
. Author Correction: Delayed production of neutralizing antibodies correlates with fatal COVID-19. Nat Med. 2021 Jul; 27(7):1309.
PMID:
34145437
.
Citations:
1
Fields:
Med
Medicine (General)
Mol
Molecular Biology
Zhao M
,
Su PY
,
Castro DA
,
Tripler TN
,
Hu Y
,
Cook M
,
Ko AI
,
Farhadian SF
,
Israelow B
,
Dela Cruz CS
,
Xiong Y
,
Sutton RE
. Rapid, reliable, and reproducible cell fusion assay to quantify SARS-Cov-2 spike interaction with hACE2. PLoS Pathog. 2021 06; 17(6):e1009683.
PMID:
34166473
.
Citations:
Fields:
Mic
Microbiology
Translation:
Humans
Cells
Farhadian SF
,
Seilhean D
,
Spudich S
. Neuropathogenesis of acute coronavirus disease 2019. Curr Opin Neurol. 2021 06 01; 34(3):417-422.
PMID:
33852526
.
Citations:
3
Fields:
Neu
Neurology
Translation:
Humans
Wang EY
,
Mao T
,
Klein J
,
Dai Y
,
Huck JD
,
Jaycox JR
,
Liu F
,
Zhou T
,
Israelow B
,
Wong P
,
Coppi A
,
Lucas C
,
Silva J
,
Oh JE
,
Song E
,
Perotti ES
,
Zheng NS
,
Fischer S
,
Campbell M
,
Fournier JB
,
Wyllie AL
,
Vogels CBF
,
Ott IM
,
Kalinich CC
,
Petrone ME
,
Watkins AE
,
Dela Cruz C
,
Farhadian SF
,
Schulz WL
,
Ma S
,
Grubaugh ND
,
Ko AI
,
Iwasaki A
,
Ring AM
. Diverse functional autoantibodies in patients with COVID-19. Nature. 2021 07; 595(7866):283-288.
PMID:
34010947
.
Citations:
90
Fields:
Sci
Science
Translation:
Humans
Animals
Lucas C
,
Klein J
,
Sundaram ME
,
Liu F
,
Wong P
,
Silva J
,
Mao T
,
Oh JE
,
Mohanty S
,
Huang J
,
Tokuyama M
,
Lu P
,
Venkataraman A
,
Park A
,
Israelow B
,
Vogels CBF
,
Muenker MC
,
Chang CH
,
Casanovas-Massana A
,
Moore AJ
,
Zell J
,
Fournier JB
,
Wyllie AL
,
Campbell M
,
Lee AI
,
Chun HJ
,
Grubaugh ND
,
Schulz WL
,
Farhadian S
,
Dela Cruz C
,
Ring AM
,
Shaw AC
,
Wisnewski AV
,
Yildirim I
,
Ko AI
,
Omer SB
,
Iwasaki A
. Delayed production of neutralizing antibodies correlates with fatal COVID-19. Nat Med. 2021 07; 27(7):1178-1186.
PMID:
33953384
.
Citations:
24
Fields:
Med
Medicine (General)
Mol
Molecular Biology
Translation:
Humans
Song E
,
Bartley CM
,
Chow RD
,
Ngo TT
,
Jiang R
,
Zamecnik CR
,
Dandekar R
,
Loudermilk RP
,
Dai Y
,
Liu F
,
Sunshine S
,
Liu J
,
Wu W
,
Hawes IA
,
Alvarenga BD
,
Huynh T
,
McAlpine L
,
Rahman NT
,
Geng B
,
Chiarella J
,
Goldman-Israelow B
,
Vogels CBF
,
Grubaugh ND
,
Casanovas-Massana A
,
Phinney BS
,
Salemi M
,
Alexander JR
,
Gallego JA
,
Lencz T
,
Walsh H
,
Wapniarski AE
,
Mohanty S
,
Lucas C
,
Klein J
,
Mao T
,
Oh J
,
Ring A
,
Spudich S
,
Ko AI
,
Kleinstein SH
,
Pak J
,
DeRisi JL
,
Iwasaki A
,
Pleasure SJ
,
Wilson MR
,
Farhadian SF
. Divergent and self-reactive immune responses in the CNS of COVID-19 patients with neurological symptoms. Cell Rep Med. 2021 05 18; 2(5):100288.
PMID:
33969321
.
Citations:
13
Lu-Culligan A
,
Chavan AR
,
Vijayakumar P
,
Irshaid L
,
Courchaine EM
,
Milano KM
,
Tang Z
,
Pope SD
,
Song E
,
Vogels CBF
,
Lu-Culligan WJ
,
Campbell KH
,
Casanovas-Massana A
,
Bermejo S
,
Toothaker JM
,
Lee HJ
,
Liu F
,
Schulz W
,
Fournier J
,
Muenker MC
,
Moore AJ
,
Konnikova L
,
Neugebauer KM
,
Ring A
,
Grubaugh ND
,
Ko AI
,
Morotti R
,
Guller S
,
Kliman HJ
,
Iwasaki A
,
Farhadian SF
. Maternal respiratory SARS-CoV-2 infection in pregnancy is associated with a robust inflammatory response at the maternal-fetal interface. Med (N Y). 2021 May 14; 2(5):591-610.e10.
PMID:
33969332
.
Citations:
13
McAlpine LS
,
Lifland B
,
Check JR
,
Angarita GA
,
Ngo TT
,
Pleasure SJ
,
Wilson MR
,
Spudich SS
,
Farhadian SF
,
Bartley CM
. Remission of Subacute Psychosis in a COVID-19 Patient With an Antineuronal Autoantibody After Treatment With Intravenous Immunoglobulin. Biol Psychiatry. 2021 08 15; 90(4):e23-e26.
PMID:
34001372
.
Citations:
2
Fields:
Psy
Psychiatry
Psy
Psychophysiology
Translation:
Humans
Ott IM
,
Strine MS
,
Watkins AE
,
Boot M
,
Kalinich CC
,
Harden CA
,
Vogels CBF
,
Casanovas-Massana A
,
Moore AJ
,
Muenker MC
,
Nakahata M
,
Tokuyama M
,
Nelson A
,
Fournier J
,
Bermejo S
,
Campbell M
,
Datta R
,
Dela Cruz CS
,
Farhadian SF
,
Ko AI
,
Iwasaki A
,
Grubaugh ND
,
Wilen CB
,
Wyllie AL
. Stability of SARS-CoV-2 RNA in Nonsupplemented Saliva. Emerg Infect Dis. 2021 04; 27(4):1146-1150.
PMID:
33754989
.
Citations:
8
Fields:
Com
Communicable Diseases
Translation:
Humans
Cells
Watkins AE
,
Fenichel EP
,
Weinberger DM
,
Vogels CBF
,
Brackney DE
,
Casanovas-Massana A
,
Campbell M
,
Fournier J
,
Bermejo S
,
Datta R
,
Dela Cruz CS
,
Farhadian SF
,
Iwasaki A
,
Ko AI
,
Grubaugh ND
,
Wyllie AL
. Increased SARS-CoV-2 Testing Capacity with Pooled Saliva Samples. Emerg Infect Dis. 2021 04; 27(4).
PMID:
33755009
.
Citations:
5
Fields:
Com
Communicable Diseases
Translation:
Humans
McPadden J
,
Warner F
,
Young HP
,
Hurley NC
,
Pulk RA
,
Singh A
,
Durant TJS
,
Gong G
,
Desai N
,
Haimovich A
,
Taylor RA
,
Gunel M
,
Dela Cruz CS
,
Farhadian SF
,
Siner J
,
Villanueva M
,
Churchwell K
,
Hsiao A
,
Torre CJ
,
Velazquez EJ
,
Herbst RS
,
Iwasaki A
,
Ko AI
,
Mortazavi BJ
,
Krumholz HM
,
Schulz WL
. Clinical characteristics and outcomes for 7,995 patients with SARS-CoV-2 infection. PLoS One. 2021; 16(3):e0243291.
PMID:
33788846
.
Citations:
8
Fields:
Med
Medicine (General)
Sci
Science
Translation:
Humans
Weiss JJ
,
Attuquayefio TN
,
White EB
,
Li F
,
Herz RS
,
White TL
,
Campbell M
,
Geng B
,
Datta R
,
Wyllie AL
,
Grubaugh ND
,
Casanovas-Massana A
,
Muenker MC
,
Moore AJ
,
Handoko R
,
Iwasaki A
,
Martinello RA
,
Ko AI
,
Small DM
,
Farhadian SF
. Tracking smell loss to identify healthcare workers with SARS-CoV-2 infection. PLoS One. 2021; 16(3):e0248025.
PMID:
33657167
.
Citations:
3
Fields:
Med
Medicine (General)
Sci
Science
Translation:
Humans
Song E
,
Zhang C
,
Israelow B
,
Lu-Culligan A
,
Prado AV
,
Skriabine S
,
Lu P
,
Weizman OE
,
Liu F
,
Dai Y
,
Szigeti-Buck K
,
Yasumoto Y
,
Wang G
,
Castaldi C
,
Heltke J
,
Ng E
,
Wheeler J
,
Alfajaro MM
,
Levavasseur E
,
Fontes B
,
Ravindra NG
,
Van Dijk D
,
Mane S
,
Gunel M
,
Ring A
,
Kazmi SAJ
,
Zhang K
,
Wilen CB
,
Horvath TL
,
Plu I
,
Haik S
,
Thomas JL
,
Louvi A
,
Farhadian SF
,
Huttner A
,
Seilhean D
,
Renier N
,
Bilguvar K
,
Iwasaki A
. Neuroinvasion of SARS-CoV-2 in human and mouse brain. J Exp Med. 2021 03 01; 218(3).
PMID:
33433624
.
Citations:
141
Fields:
All
Allergy and Immunology
Med
Medicine (General)
Translation:
Humans
Animals
Cells
Peters J
,
Alhasan S
,
Vogels CBF
,
Grubaugh ND
,
Farhadian S
,
Longbrake EE
. MOG-associated encephalitis following SARS-COV-2 infection. Mult Scler Relat Disord. 2021 May; 50:102857.
PMID:
33647592
.
Citations:
4
Fields:
Neu
Neurology
Translation:
Humans
Vogels CBF
,
Watkins AE
,
Harden CA
,
Brackney DE
,
Shafer J
,
Wang J
,
Caraballo C
,
Kalinich CC
,
Ott IM
,
Fauver JR
,
Kudo E
,
Lu P
,
Venkataraman A
,
Tokuyama M
,
Moore AJ
,
Muenker MC
,
Casanovas-Massana A
,
Fournier J
,
Bermejo S
,
Campbell M
,
Datta R
,
Nelson A
,
Dela Cruz CS
,
Ko AI
,
Iwasaki A
,
Krumholz HM
,
Matheus JD
,
Hui P
,
Liu C
,
Farhadian SF
,
Sikka R
,
Wyllie AL
,
Grubaugh ND
. SalivaDirect: A simplified and flexible platform to enhance SARS-CoV-2 testing capacity. Med (N Y). 2021 Mar 12; 2(3):263-280.e6.
PMID:
33521748
.
Citations:
63
Schwarz B
,
Sharma L
,
Roberts L
,
Peng X
,
Bermejo S
,
Leighton I
,
Casanovas-Massana A
,
Minasyan M
,
Farhadian S
,
Ko AI
,
Dela Cruz CS
,
Bosio CM
. Cutting Edge: Severe SARS-CoV-2 Infection in Humans Is Defined by a Shift in the Serum Lipidome, Resulting in Dysregulation of Eicosanoid Immune Mediators. J Immunol. 2021 01 15; 206(2):329-334.
PMID:
33277388
.
Citations:
38
Fields:
All
Allergy and Immunology
Translation:
Humans
CT
Clinical Trials
Liu F
,
Nguyen M
,
Vijayakumar P
,
Kaplan A
,
Meir A
,
Dai Y
,
Wang E
,
Walsh H
,
Ring AM
,
Omer SB
,
Farhadian SF
. Newborn Dried Blood Spots for Serologic Surveys of COVID-19. Pediatr Infect Dis J. 2020 12; 39(12):e454-e456.
PMID:
33105339
.
Citations:
3
Fields:
Com
Communicable Diseases
Ped
Pediatrics
Translation:
Humans
PH
Public Health
Kudo E
,
Israelow B
,
Vogels CBF
,
Lu P
,
Wyllie AL
,
Tokuyama M
,
Venkataraman A
,
Brackney DE
,
Ott IM
,
Petrone ME
,
Earnest R
,
Lapidus S
,
Muenker MC
,
Moore AJ
,
Casanovas-Massana A
,
Omer SB
,
Dela Cruz CS
,
Farhadian SF
,
Ko AI
,
Grubaugh ND
,
Iwasaki A
. Detection of SARS-CoV-2 RNA by multiplex RT-qPCR. PLoS Biol. 2020 10; 18(10):e3000867.
PMID:
33027248
.
Citations:
14
Fields:
Bio
Biology
Translation:
Humans
Cells
PH
Public Health
Hosier H
,
Farhadian SF
,
Morotti RA
,
Deshmukh U
,
Lu-Culligan A
,
Campbell KH
,
Yasumoto Y
,
Vogels CB
,
Casanovas-Massana A
,
Vijayakumar P
,
Geng B
,
Odio CD
,
Fournier J
,
Brito AF
,
Fauver JR
,
Liu F
,
Alpert T
,
Tal R
,
Szigeti-Buck K
,
Perincheri S
,
Larsen C
,
Larsen C
,
Gariepy AM
,
Aguilar G
,
Fardelmann KL
,
Harigopal M
,
Taylor HS
,
Pettker CM
,
Wyllie AL
,
Cruz CD
,
Ring AM
,
Grubaugh ND
,
Ko AI
,
Horvath TL
,
Iwasaki A
,
Reddy UM
,
Lipkind HS
. SARS-CoV-2 infection of the placenta. J Clin Invest. 2020 09 01; 130(9):4947-4953.
PMID:
32573498
.
Citations:
121
Fields:
Med
Medicine (General)
Translation:
Humans
Cells
PH
Public Health
Wyllie AL
,
Fournier J
,
Casanovas-Massana A
,
Campbell M
,
Tokuyama M
,
Vijayakumar P
,
Warren JL
,
Geng B
,
Muenker MC
,
Moore AJ
,
Vogels CBF
,
Petrone ME
,
Ott IM
,
Lu P
,
Venkataraman A
,
Lu-Culligan A
,
Klein J
,
Earnest R
,
Simonov M
,
Datta R
,
Handoko R
,
Naushad N
,
Sewanan LR
,
Valdez J
,
White EB
,
Lapidus S
,
Kalinich CC
,
Jiang X
,
Kim DJ
,
Kudo E
,
Linehan M
,
Mao T
,
Moriyama M
,
Oh JE
,
Park A
,
Silva J
,
Song E
,
Takahashi T
,
Taura M
,
Weizman OE
,
Wong P
,
Yang Y
,
Bermejo S
,
Odio CD
,
Omer SB
,
Dela Cruz CS
,
Farhadian S
,
Martinello RA
,
Iwasaki A
,
Grubaugh ND
,
Ko AI
. Saliva or Nasopharyngeal Swab Specimens for Detection of SARS-CoV-2. N Engl J Med. 2020 09 24; 383(13):1283-1286.
PMID:
32857487
.
Citations:
249
Fields:
Med
Medicine (General)
Translation:
Humans
Cells
PH
Public Health
Takahashi T
,
Ellingson MK
,
Wong P
,
Israelow B
,
Lucas C
,
Klein J
,
Silva J
,
Mao T
,
Oh JE
,
Tokuyama M
,
Lu P
,
Venkataraman A
,
Park A
,
Liu F
,
Meir A
,
Sun J
,
Wang EY
,
Casanovas-Massana A
,
Wyllie AL
,
Vogels CBF
,
Earnest R
,
Lapidus S
,
Ott IM
,
Moore AJ
,
Shaw A
,
Fournier JB
,
Odio CD
,
Farhadian S
,
Dela Cruz C
,
Dela Cruz C
,
Grubaugh ND
,
Schulz WL
,
Ring AM
,
Ko AI
,
Omer SB
,
Iwasaki A
. Sex differences in immune responses that underlie COVID-19 disease outcomes. Nature. 2020 12; 588(7837):315-320.
PMID:
32846427
.
Citations:
291
Fields:
Sci
Science
Translation:
Humans
Cells
Zubair AS
,
McAlpine LS
,
Gardin T
,
Farhadian S
,
Kuruvilla DE
,
Spudich S
. Neuropathogenesis and Neurologic Manifestations of the Coronaviruses in the Age of Coronavirus Disease 2019: A Review. JAMA Neurol. 2020 08 01; 77(8):1018-1027.
PMID:
32469387
.
Citations:
245
Fields:
Neu
Neurology
Translation:
Humans
Animals
Cells
PH
Public Health
Lucas C
,
Wong P
,
Klein J
,
Castro TBR
,
Silva J
,
Sundaram M
,
Ellingson MK
,
Mao T
,
Oh JE
,
Israelow B
,
Takahashi T
,
Tokuyama M
,
Lu P
,
Venkataraman A
,
Park A
,
Mohanty S
,
Wang H
,
Wyllie AL
,
Vogels CBF
,
Earnest R
,
Lapidus S
,
Ott IM
,
Moore AJ
,
Muenker MC
,
Fournier JB
,
Campbell M
,
Odio CD
,
Casanovas-Massana A
,
Herbst R
,
Shaw AC
,
Medzhitov R
,
Schulz WL
,
Grubaugh ND
,
Dela Cruz C
,
Dela Cruz C
,
Farhadian S
,
Ko AI
,
Omer SB
,
Iwasaki A
. Longitudinal analyses reveal immunological misfiring in severe COVID-19. Nature. 2020 08; 584(7821):463-469.
PMID:
32717743
.
Citations:
489
Fields:
Sci
Science
Translation:
Humans
Cells
PH
Public Health
Kluger DM
,
Aizenbud Y
,
Jaffe A
,
Parisi F
,
Aizenbud L
,
Minsky-Fenick E
,
Kluger JM
,
Farhadian S
,
Kluger HM
,
Kluger Y
. Impact of healthcare worker shift scheduling on workforce preservation during the COVID-19 pandemic. Infect Control Hosp Epidemiol. 2020 12; 41(12):1443-1445.
PMID:
32684183
.
Citations:
9
Fields:
Com
Communicable Diseases
Epi
Epidemiology
Hos
Hospitals
Nur
Nursing
Translation:
Humans
PH
Public Health
Vogels CBF
,
Brito AF
,
Wyllie AL
,
Fauver JR
,
Ott IM
,
Kalinich CC
,
Petrone ME
,
Casanovas-Massana A
,
Catherine Muenker M
,
Moore AJ
,
Klein J
,
Lu P
,
Lu-Culligan A
,
Jiang X
,
Kim DJ
,
Kudo E
,
Mao T
,
Moriyama M
,
Oh JE
,
Park A
,
Silva J
,
Song E
,
Takahashi T
,
Taura M
,
Tokuyama M
,
Venkataraman A
,
Weizman OE
,
Wong P
,
Yang Y
,
Cheemarla NR
,
White EB
,
Lapidus S
,
Earnest R
,
Geng B
,
Vijayakumar P
,
Odio C
,
Fournier J
,
Bermejo S
,
Farhadian S
,
Dela Cruz CS
,
Iwasaki A
,
Ko AI
,
Landry ML
,
Foxman EF
,
Grubaugh ND
. Analytical sensitivity and efficiency comparisons of SARS-CoV-2 RT-qPCR primer-probe sets. Nat Microbiol. 2020 10; 5(10):1299-1305.
PMID:
32651556
.
Citations:
168
Fields:
Mic
Microbiology
Par
Parasitology
Vir
Virology
Translation:
Humans
Cells
PH
Public Health
Farhadian S
,
Glick LR
,
Vogels CBF
,
Thomas J
,
Chiarella J
,
Casanovas-Massana A
,
Zhou J
,
Odio C
,
Vijayakumar P
,
Geng B
,
Fournier J
,
Bermejo S
,
Fauver JR
,
Alpert T
,
Wyllie AL
,
Turcotte C
,
Steinle M
,
Paczkowski P
,
Dela Cruz C
,
Dela Cruz C
,
Wilen C
,
Ko AI
,
MacKay S
,
Grubaugh ND
,
Spudich S
,
Barakat LA
. Acute encephalopathy with elevated CSF inflammatory markers as the initial presentation of COVID-19. BMC Neurol. 2020 Jun 18; 20(1):248.
PMID:
32552792
.
Citations:
45
Fields:
Neu
Neurology
Translation:
Humans
Cells
PH
Public Health
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Concepts (166)
Derived automatically from this person's publications.
Dried Blood Spot Testing
Cerebrospinal Fluid
Encephalitis, Viral
Microglia
Olfactory Pathways
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Co-Authors (277)
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Iwasaki, Akiko
Grubaugh, Nathan
Ko, Albert
Vogels, Chantal
Liu, Feimei
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