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UTHORS
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Trevor Bedford
Institution
Brotman Baty Institute for Precision Medicine
Address
Seattle
Washington
United States
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Publication Timeline
COVID-19 publications
All Publications
These graphs show COVID-19 publications by month since August 2019 and all publications written by authors of COVID-19 publications over the past 30 years.
To see the data from both graphs as text,
click here
.
Year
Publications
2003
1
2006
1
2008
3
2009
1
2010
2
2011
2
2012
2
2013
2
2014
5
2015
6
2016
7
2017
4
2018
8
2020
7
2021
11
These graphs show COVID-19 publications by month since August 2019 and all publications written by authors of COVID-19 publications over the past 30 years.
To return to the graphs,
click here
.
Publication Field Summary
This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text,
click here
.
This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text,
click here
.
Publication List
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications.
Show:
All coronarirus related publications
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Covid-19 specific publications
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All publications
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Most Cited
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Most Discussed
PMC Citations
indicate the number of times the publication was cited by articles in PubMed Central, and the
Altmetric
score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.)
Fields
are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication.
Translation
tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
Srivatsan S
,
Heidl S
,
Pfau B
,
Martin BK
,
Han PD
,
Zhong W
,
van Raay K
,
McDermot E
,
Opsahl J
,
Gamboa L
,
Smith N
,
Truong M
,
Cho S
,
Barrow KA
,
Rich LM
,
Stone J
,
Wolf CR
,
McCulloch DJ
,
Kim AE
,
Brandstetter E
,
Sohlberg SL
,
Ilcisin M
,
Geyer RE
,
Chen W
,
Gehring J
,
Kosuri S
,
Bedford T
,
Rieder MJ
,
Nickerson DA
,
Chu HY
,
Konnick EQ
,
Debley JS
,
Shendure J
,
Lockwood CM
,
Starita LM
. SwabExpress: An End-to-End Protocol for Extraction-Free COVID-19 Testing. Clin Chem. 2021 12 30; 68(1):143-152.
PMID:
34286830
.
Citations:
4
Fields:
Che
Chemistry
Emanuels A
,
Heimonen J
,
O'Hanlon J
,
Kim AE
,
Wilcox N
,
McCulloch DJ
,
Brandstetter E
,
Wolf CR
,
Logue JK
,
Han PD
,
Pfau B
,
Newman KL
,
Hughes JP
,
Jackson ML
,
Uyeki TM
,
Boeckh M
,
Starita LM
,
Nickerson DA
,
Bedford T
,
Englund JA
,
Chu HY
. Remote Household Observation for Noninfluenza Respiratory Viral Illness. Clin Infect Dis. 2021 12 06; 73(11):e4411-e4418.
PMID:
33197930
.
Citations:
4
Fields:
Com
Communicable Diseases
Translation:
Humans
Cells
Chung E
,
Chow EJ
,
Wilcox NC
,
Burstein R
,
Brandstetter E
,
Han PD
,
Fay K
,
Pfau B
,
Adler A
,
Lacombe K
,
Lockwood CM
,
Uyeki TM
,
Shendure J
,
Duchin JS
,
Rieder MJ
,
Nickerson DA
,
Boeckh M
,
Famulare M
,
Hughes JP
,
Starita LM
,
Bedford T
,
Englund JA
,
Chu HY
. Comparison of Symptoms and RNA Levels in Children and Adults With SARS-CoV-2 Infection in the Community Setting. JAMA Pediatr. 2021 10 01; 175(10):e212025.
PMID:
34115094
.
Citations:
6
Fields:
Ped
Pediatrics
Translation:
Humans
Annavajhala MK
,
Mohri H
,
Wang P
,
Nair M
,
Zucker JE
,
Sheng Z
,
Gomez-Simmonds A
,
Kelley AL
,
Tagliavia M
,
Huang Y
,
Bedford T
,
Ho DD
,
Uhlemann AC
. Emergence and expansion of SARS-CoV-2 B.1.526 after identification in New York. Nature. 2021 09; 597(7878):703-708.
PMID:
34428777
.
Citations:
14
Fields:
Sci
Science
Translation:
Humans
Braun KM
,
Moreno GK
,
Wagner C
,
Accola MA
,
Rehrauer WM
,
Baker DA
,
Koelle K
,
O'Connor DH
,
Bedford T
,
Friedrich TC
,
Moncla LH
. Acute SARS-CoV-2 infections harbor limited within-host diversity and transmit via tight transmission bottlenecks. PLoS Pathog. 2021 08; 17(8):e1009849.
PMID:
34424945
.
Citations:
Fields:
Mic
Microbiology
Translation:
Humans
Corey L
,
Beyrer C
,
Cohen MS
,
Michael NL
,
Bedford T
,
Rolland M
. SARS-CoV-2 Variants in Patients with Immunosuppression. N Engl J Med. 2021 08 05; 385(6):562-566.
PMID:
34347959
.
Citations:
13
Fields:
Med
Medicine (General)
Translation:
Humans
Perchetti GA
,
Zhu H
,
Mills MG
,
Shrestha L
,
Wagner C
,
Bakhash SM
,
Lin MJ
,
Xie H
,
Huang ML
,
Mathias P
,
Bedford T
,
Jerome KR
,
Greninger AL
,
Roychoudhury P
. Specific allelic discrimination of N501Y and other SARS-CoV-2 mutations by ddPCR detects B.1.1.7 lineage in Washington State. J Med Virol. 2021 10; 93(10):5931-5941.
PMID:
34170525
.
Citations:
8
Fields:
Vir
Virology
Translation:
Humans
Konings F
,
Perkins MD
,
Kuhn JH
,
Pallen MJ
,
Alm EJ
,
Archer BN
,
Barakat A
,
Bedford T
,
Bhiman JN
,
Caly L
,
Carter LL
,
Cullinane A
,
de Oliveira T
,
Druce J
,
El Masry I
,
Evans R
,
Gao GF
,
Gorbalenya AE
,
Hamblion E
,
Herring BL
,
Hodcroft E
,
Holmes EC
,
Kakkar M
,
Khare S
,
Koopmans MPG
,
Korber B
,
Leite J
,
MacCannell D
,
Marklewitz M
,
Maurer-Stroh S
,
Rico JAM
,
Munster VJ
,
Neher R
, Munnink BO,
Pavlin BI
,
Peiris M
,
Poon L
,
Pybus O
,
Rambaut A
,
Resende P
,
Subissi L
,
Thiel V
,
Tong S
,
van der Werf S
,
von Gottberg A
,
Ziebuhr J
,
Van Kerkhove MD
. SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse. Nat Microbiol. 2021 07; 6(7):821-823.
PMID:
34108654
.
Citations:
24
Fields:
Mic
Microbiology
Par
Parasitology
Vir
Virology
Translation:
Humans
Müller NF
,
Wagner C
,
Frazar CD
,
Roychoudhury P
,
Lee J
,
Moncla LH
,
Pelle B
,
Richardson M
,
Ryke E
,
Xie H
,
Shrestha L
,
Addetia A
,
Rachleff VM
,
Lieberman NAP
,
Huang ML
,
Gautom R
,
Melly G
,
Hiatt B
,
Dykema P
,
Adler A
,
Brandstetter E
,
Han PD
,
Fay K
,
Ilcisin M
,
Lacombe K
,
Sibley TR
,
Truong M
,
Wolf CR
,
Boeckh M
,
Englund JA
,
Famulare M
,
Lutz BR
,
Rieder MJ
,
Thompson M
,
Duchin JS
,
Starita LM
,
Chu HY
,
Shendure J
,
Jerome KR
,
Lindquist S
,
Greninger AL
,
Nickerson DA
,
Bedford T
. Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State. Sci Transl Med. 2021 05 26; 13(595).
PMID:
33941621
.
Citations:
7
Fields:
Med
Medicine (General)
Sci
Science
Translation:
Humans
PH
Public Health
Jackson ML
,
Hart GR
,
McCulloch DJ
,
Adler A
,
Brandstetter E
,
Fay K
,
Han P
,
Lacombe K
,
Lee J
,
Sibley TR
,
Nickerson DA
,
Rieder MJ
,
Starita L
,
Englund JA
,
Bedford T
,
Chu H
,
Famulare M
. Effects of weather-related social distancing on city-scale transmission of respiratory viruses: a retrospective cohort study. BMC Infect Dis. 2021 Apr 09; 21(1):335.
PMID:
33836685
.
Citations:
1
Fields:
Com
Communicable Diseases
Translation:
Humans
PH
Public Health
Kistler KE
,
Bedford T
. Evidence for adaptive evolution in the receptor-binding domain of seasonal coronaviruses OC43 and 229e. Elife. 2021 01 19; 10.
PMID:
33463525
.
Citations:
22
Fields:
Bio
Biology
Translation:
Humans
Cells
Rogers JH
,
Link AC
,
McCulloch D
,
Brandstetter E
,
Newman KL
,
Jackson ML
,
Hughes JP
,
Englund JA
,
Boeckh M
,
Sugg N
,
Ilcisin M
,
Sibley TR
,
Fay K
,
Lee J
,
Han P
,
Truong M
,
Richardson M
,
Nickerson DA
,
Starita LM
,
Bedford T
,
Chu HY
. Characteristics of COVID-19 in Homeless Shelters : A Community-Based Surveillance Study. Ann Intern Med. 2021 01; 174(1):42-49.
PMID:
32931328
.
Citations:
15
Fields:
Int
Internal Medicine
Translation:
Humans
PH
Public Health
Bedford T
,
Greninger AL
,
Roychoudhury P
,
Starita LM
,
Famulare M
,
Huang ML
,
Nalla A
,
Pepper G
,
Reinhardt A
,
Xie H
,
Shrestha L
,
Nguyen TN
,
Adler A
,
Brandstetter E
,
Cho S
,
Giroux D
,
Han PD
,
Fay K
,
Frazar CD
,
Ilcisin M
,
Lacombe K
,
Lee J
,
Kiavand A
,
Richardson M
,
Sibley TR
,
Truong M
,
Wolf CR
,
Nickerson DA
,
Rieder MJ
,
Englund JA
,
Hadfield J
,
Hodcroft EB
,
Huddleston J
,
Moncla LH
,
Müller NF
,
Neher RA
,
Deng X
,
Gu W
,
Federman S
,
Chiu C
,
Duchin JS
,
Gautom R
,
Melly G
,
Hiatt B
,
Dykema P
,
Lindquist S
,
Queen K
,
Tao Y
,
Uehara A
,
Tong S
,
MacCannell D
,
Armstrong GL
,
Armstrong GL
,
Baird GS
,
Chu HY
,
Shendure J
,
Jerome KR
. Cryptic transmission of SARS-CoV-2 in Washington state. Science. 2020 10 30; 370(6516):571-575.
PMID:
32913002
.
Citations:
83
Fields:
Sci
Science
Translation:
Humans
Cells
PH
Public Health
Weil AA
,
Newman KL
,
Ong TD
,
Davidson GH
,
Logue J
,
Brandstetter E
,
Magedson A
,
McDonald D
,
McCulloch DJ
,
Neme S
,
Lewis J
,
Duchin JS
,
Zhong W
,
Starita LM
,
Bedford T
,
Roxby AC
,
Chu HY
. Cross-Sectional Prevalence of SARS-CoV-2 Among Skilled Nursing Facility Employees and Residents Across Facilities in Seattle. J Gen Intern Med. 2020 11; 35(11):3302-3307.
PMID:
32875494
.
Citations:
4
Fields:
Int
Internal Medicine
Translation:
Humans
Black A
,
MacCannell DR
,
Sibley TR
,
Bedford T
. Ten recommendations for supporting open pathogen genomic analysis in public health. Nat Med. 2020 06; 26(6):832-841.
PMID:
32528156
.
Citations:
17
Fields:
Med
Medicine (General)
Mol
Molecular Biology
Translation:
Humans
Cells
PH
Public Health
Deng X
,
Gu W
,
Federman S
,
du Plessis L
,
Pybus OG
,
Faria NR
,
Wang C
,
Yu G
,
Bushnell B
,
Pan CY
,
Guevara H
,
Sotomayor-Gonzalez A
,
Zorn K
,
Gopez A
,
Servellita V
,
Hsu E
,
Miller S
,
Bedford T
,
Greninger AL
,
Roychoudhury P
,
Starita LM
,
Famulare M
,
Chu HY
,
Shendure J
,
Jerome KR
,
Anderson C
,
Gangavarapu K
,
Zeller M
,
Spencer E
,
Andersen KG
,
MacCannell D
,
Paden CR
,
Li Y
,
Zhang J
,
Tong S
,
Armstrong G
,
Morrow S
,
Willis M
,
Matyas BT
,
Mase S
,
Kasirye O
,
Park M
,
Masinde G
,
Chan C
,
Yu AT
,
Chai SJ
,
Villarino E
,
Bonin B
,
Wadford DA
,
Chiu CY
. Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California. Science. 2020 07 31; 369(6503):582-587.
PMID:
32513865
.
Citations:
97
Fields:
Sci
Science
Translation:
Humans
Cells
PH
Public Health
Jorden MA
,
Rudman SL
,
Villarino E
,
Hoferka S
,
Patel MT
,
Bemis K
,
Simmons CR
,
Jespersen M
,
Iberg Johnson J
,
Mytty E
,
Arends KD
,
Henderson JJ
,
Mathes RW
,
Weng CX
,
Duchin J
,
Lenahan J
,
Close N
,
Bedford T
,
Boeckh M
,
Chu HY
,
Englund JA
,
Famulare M
,
Nickerson DA
,
Rieder MJ
,
Shendure J
,
Starita LM
. Evidence for Limited Early Spread of COVID-19 Within the United States, January-February 2020. MMWR Morb Mortal Wkly Rep. 2020 Jun 05; 69(22):680-684.
PMID:
32497028
.
Citations:
49
Fields:
Pub
Public Health
Vit
Vital Statistics
Translation:
Humans
Cells
PH
Public Health
Chu HY
,
Englund JA
,
Starita LM
,
Famulare M
,
Brandstetter E
,
Nickerson DA
,
Rieder MJ
,
Adler A
,
Lacombe K
,
Kim AE
,
Graham C
,
Logue J
,
Wolf CR
,
Heimonen J
,
McCulloch DJ
,
Han PD
,
Sibley TR
,
Lee J
,
Ilcisin M
,
Fay K
,
Burstein R
,
Martin B
,
Lockwood CM
,
Thompson M
,
Lutz B
,
Jackson M
,
Hughes JP
,
Boeckh M
,
Shendure J
,
Bedford T
. Early Detection of Covid-19 through a Citywide Pandemic Surveillance Platform. N Engl J Med. 2020 07 09; 383(2):185-187.
PMID:
32356944
.
Citations:
37
Fields:
Med
Medicine (General)
Translation:
Humans
Cells
PH
Public Health
Dudas G
,
Carvalho LM
,
Rambaut A
,
Bedford T
. MERS-CoV spillover at the camel-human interface. Elife. 2018 01 16; 7.
PMID:
29336306
.
Citations:
61
Fields:
Bio
Biology
Translation:
Humans
Animals
Cells
PH
Public Health
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Concepts (146)
Derived automatically from this person's publications.
Genome, Microbial
Biological Evolution
Adaptation, Physiological
Population Dynamics
Simian Acquired Immunodeficiency Syndrome
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Co-Authors (261)
People in Profiles who have published with this person.
Chu, Helen
Starita, Lea
Neher, Richard
Jerome, Keith
Müller, Nicola
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